Peer reviewed publications co-authored by BISI graduate students (in bold)

2015

  • Scott Krauss, Karla M Stucker, Seth A Schobel, Angela Danner, Kimberly Friedman, James P Knowles, Ghazi Kayali, Lawrence J Niles, Amanda D Dey, Garnet Raven, Paul Pryor, Xudong Lin, Suman R Das, Timothy B Stockwell, David E Wentworth,* and Robert G Webster, Emerging Microbes & Infections (2015) 4, e35; doi:10.1038/emi.2015.35. Published online 17 June 2015

  • A. Martel, M. Blooi, C. Adriaensen, P. Van Rooij, W. Beukema, M. C. Fisher, R. A. Farrer, B. R. Schmidt, U. Tobler, K. Goka, K. R. Lips, C. Muletz, K. R. Zamudio, J. Bosch, S. Lötters, E. Wombwell, T. W. J. Garner, A. A. Cunningham, A. Spitzen-van der Sluijs, S. Salvidio, R. Ducatelle, K. Nishikawa, T. T. Nguyen, J. E. Kolby, I. Van Bocxlaer, F. Bossuyt, and F. Pasmans
    Recent introduction of a chytrid fungus endangers Western Palearctic salamanders, Science 31 October 2014: 346 (6209), 630-631. [DOI:10.1126/science.1258268]
  • Zapata, F, FE Goetz, SA Smith, M Howison, S Siebert, S Church, SM Sanders, CL Ames, CS McFadden, SC France, M Daly, AG Collins, SHD Haddock, CW Dunn, P Cartwright (2015) Phylogenomic analyses support traditional relationships within Cnidaria. PLoS One 10(10): e0139068. http://dx.doi.org/10.1371/journal.pone.0139068.
  • Shah S, Cannon JR, Fenselau C, Briken V, A Duplicated ESAT-6 Region of ESX-5 is Involved in Protein Export and Virulence of Mycobacteria, Infect. Immun. 2015, Nove; 83(11); 9329-61. doi: 10.1128/IAI.00827-15.
  • Antonio Carlos Marques, Jimena García, Cheryl Lewis Ames, Internal fertilization and sperm storage in cnidarians: a response to Orr and Brennan, Trends in Ecology & Evolution, Volume 30, Issue 8, August 2015, Pages 435-436, ISSN 0169-5347, http://dx.doi.org/10.1016/j.tree.2015.06.002
  • Jessica A. Goodheart, Adam L. Bazinet, Allen G. Collins, Michael P. Cummings; Relationships within Cladobranchia (Gastropoda: Nudibranchia) based on RNA-Seq data: an initial investigation R. Soc. open sci. 2015 2 150196; DOI: 10.1098/rsos.150196. Published 23 September 2015
  • Hyun, S.I., Maruri-Avidal, L., Moss, B., 2015. Topology of Endoplasmic Reticulum-Associated Cellular and Viral Proteins Determined with Split-GFP. Traffic. 10, 787-795
  • Reynolds, S.E., Moss, B., 2015. Characterization of a large, proteolytically processed cowpox virus membrane glycoprotein conserved in most chordopoxviruses. Virology 483, 209-217
  • Viktorova EG, Nchoutmboube J, Ford-Siltz LA and Belov GA. 2015. Cell-Specific Establishment of Poliovirus Resistance to an Inhibitor Targeting a Cellular Protein. J Virol  89, 4372-4386. 
  • Nchoutmboube J, Ford-Siltz LA and Belov GA. 2015. Enterovirus replication: go with the (counter) flow. Trends in Microbiology 23, 183-184.
  • Le, My T., Brown, R.E., Simon, A.E., and Dayie, T.K. 2015.  In vivo, large-scale preparation of uniformly 15N- and site-specifically 13C- labeled homogeneous, recombinant RNA for NMR structural studies. Methods in Enzymology, in press.
  • Darwish, O., Shahan, R., Liu, Z., SLovin, JP, Alkharouf NW Re-annotation of the woodland strawberry (Fragaria vesca) genome BMC Genomics. 2015 Jan 27;16:29. doi: 10.1186/s12864-015-1221-1
  • Riley ME, Johnston CA, Feller IC, Griffen BD. 2014. Range expansion of Aratus pisonii (Mangrove tree crab) into novel salt marsh habitats. Southeastern Naturalist 13(4): N43-N48.
  • Achuthan, Vasudevan and DeStefano, Jeffery Alternative divalent cations (Zn2+, Co2+, and Mn2+) are not mutagenic at conditions optimal for HIV-1 reverse transcriptase activity BMC Biochemistry, 2015 <au 3' 16 (1):12 doi: 10.1185/s12858-015-0041-x
  • VanBlargan, LA, Davis KA, Dowd, KA, Akey DL, Smith JL, and Pierson TC Context-dependent cleavage of the capsid protein by the West Nile virus protease modulates the efficiency of virus assembly,  J. Virology, 2015, Jun 10 pii: JVI01253-15 [Epub ahead of print]. Available online.
  • Laura A. L. Dillon, Kwame Okrah, V. Keith Hughitt, Rahul Suresh, Yuan Li,Maria Cecilia Fernandes, A. Trey Belew, Hector Corrada Bravo, David M. Mosser,and Najib M. El-Sayed Transcriptomic profiling of gene expression and RNA processing duringLeishmania major differentiation Nucl. Acids Res. first published online July 6, 2015 doi:10.1093/nar/gkv656. Available online.
  • Bryan D. Fleming, Prabha Chandrasekaran, Laura A. L. Dillon, Elizabeth Dalby, Rahul Suresh, Arup Sarkar, Najib El-Sayed, and David M. Mosser (2015) The generation of macrophages with anti-inflammatory activity in the absence of STAT6 signaling, J. Leukocyte Biology,  jlb-2A1114.  Abstract available online.
  • rinivasan, P., Zhang, X-N., Bouten, R. and Chang, C.; (2015) Ferret: a sentence-based literature scanning system, BMC Bioinformatics, 16: 198.  doi:10.1186/s12859-015-0630-0.  Available online.
  • Noam Cvikel, Katya Egert Berg, Eran Levin, Edward Hurme, Ivailo Borissov, Arjan Boonman, Eran Amichai, Yossi Yovel, Bats Aggregate to Improve Prey Search but Might Be Impaired when Their Density Becomes Too High, Current Biology, Volume 25, Issue 2, 19 January 2015, Pages 206-211, ISSN 0960-9822. doi:10.1016/j.cub.2014.11.010. Available online.
  • Noam Cvikel, Eran Levin, Edward Hurme, Ivailo Borissov, Arjan Boonman, EranAmichai, Yossi Yovel On-board recordings reveal no jamming avoidance in wild bats  Proc. R. Soc. B 2015 282 20142274; DOI: 10.1098/rspb.2014.2274. Published 26 November 2014.  Available online.
  • Stucker KM, Schobel SA, Olsen RJ, Hodges HL, Lin X, Halpin RA, Fedorova N, Stockwell TB, Tovchigrechko A, Das SR, Wentworth DE, Musser JM. Haemagglutinin mutations and glycosylation changes shaped the 2012/13 influenza A(H3N2) epidemic, Houston, Texas. Euro Surveill. 2015;20(18):pii=21122.  Available online.
  • Peng, M., Bitsko, E., and Biswas, D. (2015). Functional properties of peanut fractions on the growth of probiotics and foodborne bacterial pathogens. Food Science, in press, DOI:10.1111/1750-3841.
  • Peng, M., Aryal, U., Cooper, B., and Biswas, D. (2015). Metabolites produced during the growth of probiotics in cocoa supplementation and the limited role of cocoa in host-enteric bacterial pathogen interactions. Food control, 53:124-133.
  • Pawson DL, Nizinski M, Lewis Ames C, Pawson DJ (In Press) Deep-sea holothurians and echinoids (Echinodermata) from the vicinity of cold seeps and coral habitats in the northern central Gulf of Mexico. B. Mar. Sci.

2014

  • Niu, D., Zheng, H., Corona, M., Lu, Y., Chen, X., Cao, L., Sohr A., and F. Hu. (2014) Transcriptome comparison between inactivated and activated ovaries of the honey bee Apis mellifera L. Insect. Mol. Biol. 23(5):668-81. doi: 10.1111/imb.12114
  • Martel, A., Blooi, M., Adriaensen, C., Van Rooij, P., Beukema, W., Fisher, M.C., Farrer, R.A., Schmidt, B.R., Tobler, U., Goka, K., Lips, K.R., Muletz, C., Zamudio, K.R., Bosch, J., Lotters, S., Wombwell, E., Garner, T.W.J., Cunningham, A.A., Spitzen-van der Sluijs, A., Salvidio, S., Ducatelle, R., Nishikawa, K., Nguyen, T.T., Kolby, J.E., Van Bocxlaer, I., Bossuyt, F., Pasmans, F., 2014. Recent introduction of a chytrid fungus endangers Western Palearctic salamanders. Science 346, 630-631
  • Muletz, C.R., Caruso, N.M., Fleischer, R.C., McDiarmid, R.W., Lips, K., 2014. Unexpected rarity of the pathogen Batrachochytrium dendrobatidis in Appalachian Plethodon salamanders: 1957–2011. PLoS ONE 9(8): e103728. doi:10.1371/journal.pone.010372
  • Lin SH, Cherian N, Wu B, Phee H, Cho C, Colombini M.; 2014; Bax channel triplet: co-operativity and voltage gating.; Biochemical Journal; 397-404.
  • Kun Wang, Avinash Das, Zheng-Mei Xiong, Kan Cao and Sridhar Hannenhalli: 2014,Phenotype-dependent coexpression gene clusters: application to normal and premature ageing. Transactions on Computational Biology and Bioinformatics(TCBB) (doi: TCBB.2014.2359446)
  • Ioannidis, Panagiotis; Lu, Yong; Kumar, Nikhil; Creasy, Todd; Daugherty, Sean; Chibucoss,Marcus chibucos; Orvis, Joshua; Shetty, Amol; Ott, Sandra; Flowers, Melissa; Sengamalay, Naomi; Tallon, Luke; Pick, Leslie; Dunning Hotopp, Julie. 2014. Rapid transcriptome sequencing of an invasive pest, the brown marmorated stink bug Halyomorpha halys. BMC Genomics 15, 738.
  • Hussman, KL, Vandergaast R, Ochsner SP, Huang AC, Gale M Jr, Fredericksen, BL (2014) In vitro and in vivo characterization of a West Nile virus MAD78 infectious clone. Arch Virol. 2014 Jul 15
  • Huang C, Chen M, Pang D, Bi D, Zou Y, Xia X, Yang W, Luo L, Deng R, Tan H, Zhou L, Yu S, Guo L, Du X, Cui Y, Hu J, Mao Q, Worley PF, Xiao B. 2014 Aug 25; Developmental and Activity-Dependent Expression of LanCL1 Confers Antioxidant Activity Required for Neuronal Survival. Dev Cell. 30(4):479-87.
  • Hosen, J.D., O.T. McDonough, C.M. Febria, and M.A. Palmer. 2014. Dissolved organic matter quality and bioavailability changes across an urbanization gradient in headwater streams. Environmental Science & Technology. 48: 7817-7824.
  • McDonough, O.T., M.W. Lang, J.D. Hosen, and M.A. Palmer. 2014. Surface hydrologic connectivity between Delmarva Bay wetlands and nearby streams along a gradient of agricultural alteration. Wetlands. 35: 41-53.
  • Hawkins, Charles and Liu, Zhongchi; 2014, A Model for an Early Role of Auxin in Arabidopsis Gynoecium Morphogenesis, Frontiers in Plant Science, 5:32
  • Goodheart, Jessica, Camacho-Garcia, Yolanda, Padula, Vinicius, Schrödl, Cervera, Juan L., Gosliner, Terrence M. & Valdés, Ángel. In press. Systematics and biogeography of Pleurobranchus Cuvier, 1804 sea slugs (Heterobranchia: Nudipleura: Pleurobranchidae). Zoological Journal of the Linnean Society.
  • Gammerdinger William, Conte Matthew, Acquah Enoch, Roberts Reade, Kocher Thomas; 2014, Structure and decay of a proto-Y region in Tilapia, Oreochromis niloticus, BMC Genomics, 15:975.
  • Baar Marsha, Gammerdinger William, Leap Jennifer, Morales Erin, Shikora Jonathan, Weber Michael; 2014, Pedagogical Comparison of Five Reactions Performed under Microwave Heating in Multi-Mode versus Mono-Mode Ovens: Diels–Alder Cycloaddition, Wittig Salt Formation, E2 Dehydrohalogenation To Form an Alkyne, Williamson Ether Synthesis, and Fischer Esterification, Journal of Chemical Education, 91(10):1720-1724.
  • Finegan, Bryan; Peña-Claros, Marielos; Oliveira, Alexandre; Ascarrunz, Nataly; Bret-Harte, M. Syndonia; Carreño-Rocabado, Geovana; Casanoves, Fernando; Velepucha, Paul Eguiguren; Fernandez, Fernando; Licona, Juan Carlos; Lorenzo, Leda; Salgado Negret, Beatriz; Vaz, Marcel; Poorter, Lourens; 2014, Does functional trait diversity predict above-ground biomass and productivity of tropical forests? Testing three alternative hypothesis, Journal of Ecology, 103:191-201.
  • Faircloth BC, Branstetter MG, White ND, Brady SG. 2014. Target enrichment of ultraconserved elements from arthropods provides a genomic perspective on relationships among Hymenoptera. Molecular Ecology Resources: DOI: 10.1111/1755-0998.12328
  • Estrada, A., Gratwicke, B., Benedetti, A., DellaTogna, G., Garrelle, D., Griffith, E., Ibañez, R., Ryan, S., and Miller, P.S. (Eds.). 2014. The Golden Frogs of Panama (Atelopus zeteki, A. varius): A Conservation Planning Workshop. Final Report. Apple Valley, MN: IUSN/SSC Conservation Breeding Specialist Group.
  • Dillon, Laura AL, Okrah, Kwame, Hughitt, V. Keith, Suresh, Rahul, Li, Yuan, Belew, A. Trey, Corrada Bravo, Hector, Mosser, David M., El-Sayed, Najib M.; 2015 (submitted), Transcriptomic profiling of gene expression and RNA processing during Leishmania major differentiation. Nucleic Acids Researc
  • Fleming, Bryan, Chandrasekaran, Prabha, Dillon, Laura, Dalby, Elizabeth, Suresh, Rahul, Sarkar, Arup, El-Sayed, Najib, Mosser, David; 2015 (under review). The generation of macrophages with immunoregulatory activity in the absence of STAT6 signaling. Journal of Leukocyte Biology
  • Diller & Fenster 2014, Corolla chirality in Hypericum irazuense and H. costaricense (Hypericaceae): parallels with monomorphic enantiostyly, Journal of Torrey Botanical Society.141(2):109-114
  • Devanapally S, Ravikumar S, Jose AM, 2015,Double-stranded RNA made in C. elegans neurons can enter the germline and cause transgenerational gene silencing, PNAS, 112(7)
  • Darwish, O., Shahan, R., Liu, Z., Slovin, J.P., Alkharouf, N. (Jan 2015) Reannotation of the woodland strawberry (Fragaria vesca) genome. BMC Genomics. 16(1):29-37.
  • Cole, Stephanie J, Records, Angela R, Orr, Mona W, Linden, Sara B, Lee, Vincent T; 2014,Catheter-associated urinary tract infection by Pseudomonas aeruginosa is mediated by exopolysaccharide-independent biofilms,82: 2048-2058.
  • Lieberman, Ori J, Orr, Mona W, Wang, Yan, Lee, Vincent T; 2014, High-throughput screening using the differential radial capillary action of ligand assay identifies ebselen as an inhibitor of diguanylate cyclases, ACS Chem Biol.,9: 183-192.
  • Choi H, Zhang L, Cembrowski MS, Sabottke CM, Markowitz A, Butts DA, Kath WL, Singer JH, Riecke H (2014) Intrinsic bursting of AII amacrine cells underlies oscillations in the rd1 mouse retina. Journal of Neurophysiology 112: 1491-504.
  • Chattopadhyay M, Kuhlmann MM, Kumar K, Simon AE; 2014, Position of the kissing-loop interaction associated with PTE-type 3’CITEs can affect enhancement of cap-independent translation, Virology, 458-459:43-52
  • Chang J., Clay J.M. and Chang C. (2014) Association of cytochrome b5 with ETR1 ethylene receptor signaling through RTE1 in Arabidopsis.  Plant Journal.  77, 558-567.
  • Cavanaugh, Kyle C., Kellner, James R., Forde, Alexander J., Gruner, Daniel S., Parker, John D., Rodriguez, Wilfred, and Feller, Ilka C. 2014. Poleward expansion of mangroves is a threshold response to decreased frequency of extreme cold events. Proceedings of the National Academy of Sciences of the United States of America 111:723–727.
  • Carter, Gerald; 2014, The reciprocity controversy, Animal Behavior and Cognition, 1, 368-386. 
  • Kershenbaum Arik, Blumstein D, Roch M, Akcay C, Backus G, Bee M, Bohn K, Cao Y, Carter G et al. (42 authors); 2014, Acoustic sequences in non-human animals: A tutorial review and prospectus, Biological Reviews. doi:10.1111/brv.12160C.R.
  • Woodford, E.P. Frady, R.S. Smith, B Morey, G Canzi, R.C. Araneda, W.B. Kristan, Jr., C.P. Kubiak, E.W. Miller, and R.Y. Tsien. “Improved conductive molecules for optically sensing voltage in neurons” J. Am. Chem. Soc. DOI: 10.1021/ja510602z.
  • Broadbent, AJ, Santos, CP, Godbout, RA, and Subbarao, K. 2014. The temperature-sensitive and attenuation phenotypes conferred by mutations in the influenza virus PB2, PB1, and NP genes are influenced by the species of origin of the PB2 gene in reassortant viruses derived from influenza A/California/07/2009 and A/WSN/33 viruses. J. Virol. 88 (21):12339-47. 
  • Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alföldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleton KL, Conte MA, D’Cotta HD, Eshel O, Gaffney L, Galibert F, Gante HF, Gnerre S, Greuter L, Guyon R, Haddad NS, Haerty W, Harris RM, Hofmann HA, Hourlier T, Hulata G, Jaffe DB, Lara M, Lee AP, MacCallum I, Mwaiko S, Nikaido M, Nishihara H, Ozouf-Costaz C, Penman DJ, Przybylski D, Rakotomanga M, Renn SCP, Ribeiro FJ, Ron M, Salzburger W, Sanchez-Pulido L, Santos ME, Searle S, Sharpe T, Swofford R, Tan FJ, Williams L, Young S, Yin S, Okada N, Kocher TD, Miska EA, Lander ES, Venkatesh B, Fernald RD, Meyer A, Ponting CP, Streelman JT, Lindblad-Toh K, Seehausen O, Di Palma F. (2014). The genomic substrate for adaptive radiation in African cichlid fish. Nature, 513, 375–381. doi:10.1038/nature13726
  • Schulte, JE, O’Brien, CS, Conte, MA, O’Quin, KE, & Carleton, KL. (2014). Interspecific variation in Rx1 expression controls opsin expression and causes visual system diversity in African cichlid fishes. Molecular Biology and Evolution, 31(9), 2297–308. doi:10.1093/molbev/msu172
  • Valente, GT, Conte, MA, Fantinatti, BEA, Cabral-de-Mello, DC, Carvalho, RF, Vicari, MR, Kocher, TD, Martins, C. (2014). Origin and evolution of B chromosomes in the Cichlid Fish Astatotilapia latifasciata based on integrated genomic analyses. Molecular Biology and Evolution, 31(8), 2061–72. doi:10.1093/molbev/msu148
  • Biochemical and biophysical characterization of PlyGRCS, a bacteriophage endolysin active against Methicillin-Resistant Staphylococcus aureus. Sara B. Linden, Helena Zhang, Ryan Heselpoth, Yang Shen, Mathias Schmelcher, Fritz Eichenseher, Daniel C. Nelson. Applied Microbiology and Biotechnology.  August 2014
  • Bachvaroff T. R., Gornik S. G., Concepcion G. T., Waller R. F., Mendez G. S., Lippmeier J. C. & Delwiche C. F. 2014. Dinoflagellate phylogeny revisited: using ribosomal proteins to resolve deep branching dinoflagellate clades. 70:314–322.
  • Angeli, N. P., G. V. DiRenzo, A. J. Cunha, and K. R. Lips. In press. Spatial patterns of Espadarana prosoblepon. Journal of Herpetology. 
  • Ellison, A. R., T. S. Tunstall, G. V. DiRenzo, M. C. Hughey, E. A. Rebollar, L. K. Belden, Reid N. Harris, Roberto Ibáñez, Karen R. Lips, Kelly R. Zamudio. 2014. More than skin deep: functional genomic basis for resistance to amphibian chytridiomycosis. Geonome Biology & Evolution: doi: 10.1093/gbe/evu28
  • Ellison, A. R., A. Savage, G. V. DiRenzo, P. F. Langhammer, K. R. Lips, and K. R. Zamudio. 2014. Fighting a losing battle: vigorous immune response countered by pathogen suppression of host defenses in a chytridiomycosissusceptible frog Atelopus zeteki. G3 4: 1275 – 1289.
  • DiRenzo, G. V., P. F. Langhammer, K. R. Zamudio, and K. R. Lips. 2014. Fungal infection intensity and zoospore outputof Atelopus zeteki, a potential supershedder. PLoS ONE 9(3): e93356.
  • Achuthan Vasudevan, Keith Brian, Connolly Bernard, DeStefano Jeffrey., 2014, Human immunodeficiency virus reverse transcriptase displays dramatically higher fidelity under physiological magnesium conditions in vitro, J.Virol;88(15):8514-27
  • Sulima S.O., Patchett S., Advani V.M., De KeersmaeckerK, JohnsonA.W. and Dinman J.D. .(2014)  Bypass of the pre-60S ribosomal quality control as a pathway to oncogenesis. Proceedings of the Natl. Academy of Science USA (PNAS) 111:5640-5.
  • Belew, A.T., Meskauskas, A., Musalgaonkar, S., Advani, V.M., Sulima S.O. andDinman J.D. Ribosomal frameshifting in the CCR5 mRNA is regulated by miRNAs and the NMD pathway. Nature 512: 265-269
  • Pawson DL, Nizinski M, Lewis Ames C, Pawson DJ (In Press) Deep-sea holothurians and echinoids (Echinodermata) from the vicinity of cold seeps and coral habitats in the northern central Gulf of Mexico. B. Mar. Sci.

2013

  • Zhang H, Kieckhaefer JE, Cao K. (2013) Mouse Models of Laminopathies. Aging Cell. pp1-9

  • McCord R, Nazario-Toole A, Zhang H, Chines P, Zhan Y, Erdos MR, Collins FS, Dekker J, and Cao K. (2013) Correlated Alterations in Genome Organization, Histone Methylation, and DNA-Lamin A/C Interactions in Hutchinson-Gilford Progeria Syndrome. Genome Research Feb; 23(2): 260-9

  • Yang, Zhilong, Maruri-Avidal, Liliana, Sisler, Jerry, Stuart, Carey, and Moss, Bernard; 2013, Cascade regulation of vaccinia virus gene expression is modulated by multistage promoters, Virology, 447(1-2): 213-220.

  • Xiong, Zhengmei; LaDana, Christina; Wu, Di; Cao, Kan; (2013). An inhibitory role of progerin in the gene induction network of adipocyte differentiation from iPS cells. Aging April 5(4): 288-303.

  • Wang, Wenming; Zhang, Yi; Wen, Yingqiang; Berkey, Robert; Ma, Xianfeng; Pan, Zhiyong; Bendigeri, Dipti; King, Harlan; Zhang, Qiong; Xiao, Shunyuan; 2013; A comprehensive mutational analysis of the Arabidopsis resistance protein RPW8.2 reveals key amino acids for defense activation and protein targeting; The Plant Cell; vol. 25 no. 10 4242-4261

  • Vonetta L. Edwards, Liang-Chun Wang, Valerie Dawson, Daniel C. Stein and Wenxia Song; 2013, Neisseria gonorrhoeae breaches the apical junction of polarized epithelial cells for transmigration by activating EGFR, Cellular Microbiology 15(6), 1042–1057

  • Verma, Vishal; Rico-Martinez, Roberto; Kotra, Neel; Rennolds, Corey; Liu, Jiumeng; Snell, Terry; Weber, Rodney; 2013, Estimating the toxicity of ambient fine aerosols using freshwater rotifer Brachionus calyciflorus (Rotifera: Monogononta), Environmental Pollution, 182: 379-384

  • VanBlargan, L. A., Mukherjee, S., Dowd, K. A., Durbin, A. P., Whitehead, S. S., & Pierson, T. C. (2013). The Type-Specific Neutralizing Antibody Response Elicited by a Dengue Vaccine Candidate Is Focused on Two Amino Acids of the Envelope Protein. PLoS Pathogens, 9(12), e1003761.

  • van der Plas, F., Zeinstra, P., Veldhuis, M., Fokkema, R., Tielens, E., Howison, R. & Olff, H. (2013) Responses of savanna lawn and bunch grasses to water limitation. Plant Ecology, 214, 1157-1168.

  • Sulima, Sergey O.; Gulay, Suna P.; Anjos, Margarida; Patchett, Stephanie; Meskauskas, Arturas; Johnson, Arlen W. and Dinman, Jonathan D.; 2013, Eukaryotic rpL10 drives ribosomal rotation, Nucleic Acids Research; 1-15, doi: 10.1093/nar/gkt1107 (epub ahead of print)

  • Sulima Sergey O, Gulay Suna P, Anjos M, Patchett S, Meskauskas Arturas, Johnson Arlen W, Dinman Jonathan D. 2013. Eukaryotic rpL10 drives ribosomal rotation. Nucleic Acids Research. In press.

  • Gao Feng, Gulay Suna P, Kasprzak W, Dinman Jonathan D, Shapiro Bruce A, Simon Anne E. 2013. The kissing-loop T-shaped structure translational enhancer of pea enation mosaic virus can bind simultaneously to ribosomes and a 5' proximal hairpin. Journal of Virology. 87(22):11987-2002.

  • Stearns, Frank, Tilmon, Kelley and Wood, Thomas; 2013, Felsenstein’s “one-allele model” of speciation: The role of philopatry in the initial stages of host plant mediated reproductive isolation in Enchenopa binotata, Current Zoology, 59:658-666.

  • Stearns, Frank and Fenster, Charles; 2013, Evidence for parallel adaptation to climate across the natural range of Arabidopsis thaliana, Ecology and Evolution, 3:2241-2250.

  • Song Wenxia, Liu Chaohong, Seeley-Fallen Margaret Kathryn, Miller Heather, Ketchum Christina, Upadhyaya Arpita; 2013, Actin-mediated feedback loops in B-cell receptor signaling. Immunological Reviews, Vol. 256: 177–189

  • Chaohong Liu, Margaret K. Fallen, Heather Miller, Arpita Upadhyaya, Wenxia Song;  The actin cytoskeleton coordinates the signal transduction and antigen processing functions of the B cell antigen receptor, Frontiers in Biology, 2013, 8(5): 475–485

  • Smith SB, Magid-Slav M, Brown JR (2013) Host Response to Respiratory Bacterial Pathogens as Identified by Integrated Analysis of Human Gene Expression Data. PLoS ONE 8(9): e75607. doi:10.1371/journal.pone.007560

  • Shah Swati, Bohsali Amro, Ahlbrand Sarah, Srinivasan Lalitha, Rathinam Vijay, Vogel Stephanie, Fitzgerald Katherine, Sutterwala Fayas, Briken Volker; 2013, Mycobacterium tuberculosis but not nonvirulent mycobacteria inhibits IFN-β and AIM2 inflammasome-dependent IL-1β production via its ESX-1 secretion system, Journal of Immunology, 191(7):3514-8

  • Briken Volker, Ahlbrand Sarah, Shah Swati; 2013, Mycobacterium tuberculosis and the host cell inflammasome: a complex relationship, Frontiers in Cellular and Infection Microbiology, 3:62

  • Serrano D, Ansar M, Papademetriou J, Bhowmick T, Muro S. (2013) Biological functionalization of drug delivery carriers to bypass size restrictions of receptor-mediated endocytosis independently from receptor targeting. ACS Nano, 7(12):10597-10611
  • Papademetriou J, Garnacho C, Serrano D, Bhowmick T, Schuchman EH, Muro S. (2013) Comparative binding, endocytosis, and biodistribution of antibodies and antibody-coated carriers for targeted delivery of lysosomal enzymes to ICAM-1 versus transferrin receptor. J Inherit Metab Dis. 36(3):467-477
  • Rushing, CS, Ryder, TB, Saracco, J & Marra, PP. 2013. Assessing migratory connectivity for a long-distance migratory bird using multiple intrinsic markers. Ecological Applications. http://dx.doi.org/10.1890/13-1091.1

  • Ranz, Jose M, Yeh, Shu-Dan, Nyberg, Kevin G, and Machado, Carlos A; 2013, Transcriptome Profiling of Drosophila Interspecific Hybrids: Insights into Mechanisms of Regulatory Divergence and Hybrid Dysfunction, Polyploid and Hybrid Genomics: 15-35.

  • Pattern recognition receptors in innate immunity, host defense, and immunopathology. Suresh R, Mosser DM. Adv Physiol Educ. 2013 Dec;37(4):284-91. doi: 10.1152/advan.00058.2013.

  • O’Quin, CT, Drilea AC, Conte MA, Kocher TD. 2013. Pigment QTL detection using a new Metriaclima zebra anchored assembly. BMC Genomics 14:287.

  • O’Quin, C., Drilea, A. C., Conte, M. A., & Kocher, T. D. (2013). Mapping of pigmentation QTL on an anchored genome assembly of the cichlid fish, Metriaclima zebra. BMC genomics, 14(1), 287.

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